KLIFS - the kinase structures database

Version: 3.2
Updated: 29-Oct-2025

KIT proto-oncogene receptor tyrosine kinase

Kinase structure
Kinase:	KIT
Family:	PDGFR
Group:	TK
Species:	HUMAN
IUPHAR/BPS ID:	1805
PDB:	3G0E
sc-PDB:
KIDFamMap:	Search
Release date:	2009-02-24
PubMed:	19164557
Chain:	A
(Alternate) Model:	A
Orthosteric ligand:	B49

More entries for 3G0E
3G0E	Alternative model:	B	Chain:	A

Structural information
DFG conformation:	out
αC-helix conformation:	in
G-rich loop angle (distance):	65° (19.4Å)
G-rich loop rotation:	51.5°
Quality Score:	7.2
Resolution:	1.6 Å
Missing Residues:	0
Missing Atoms:	0

Ligand binding mode
Pockets	Subpockets	Waters
front		Cluster I1	Ligand No	Protein Yes

Pocket alignment
Uniprot sequence:	KTLGAGAFGKVVEVAVKMLALMSELKVLSYLGMNIVNLLGALVITEYCCYGDLLNFLRRFLASKNCIHRDLAARNILLICDFGLA
Sequence structure:	KTLGAGAFGKVVEVAVKMLALMSELKVLSYLGMNIVNLLGALVITEYCCYGDLLNFLRRFLASKNCIHRDLAARNILLICDFGLA

Ligand affinity
ChEMBL ID:	CHEMBL535
Bioaffinities:	1059 records for 259 kinases

Species	Kinase (ChEMBL naming)	Median	Min	Max	Type	Records
Homo sapiens	3-phosphoinositide dependent protein kinase-1	5.5	5.5	5.5	pKd	3
Homo sapiens	Adaptor-associated kinase	8	6.9	8	pKd	4
Homo sapiens	ALK tyrosine kinase receptor	5.6	5.6	7.3	pIC50	2
Homo sapiens	ALK tyrosine kinase receptor	6.8	6.8	6.8	pKd	3
Homo sapiens	AMP-activated protein kinase, alpha-1 subunit	7.7	7.3	7.7	pKd	5
Homo sapiens	AMP-activated protein kinase, alpha-2 subunit	7.1	7.1	7.1	pKd	3
Homo sapiens	Ankyrin repeat and protein kinase domain-containing protein 1	6.5	6.5	6.5	pKd	3
Homo sapiens	BMP-2-inducible protein kinase	8.3	7.4	8.3	pKd	5
Homo sapiens	Bone morphogenetic protein receptor type-1B	5.6	5.6	5.6	pKd	1
Homo sapiens	Bone morphogenetic protein receptor type-2	6.2	6.2	6.2	pKd	3
Homo sapiens	BR serine/threonine-protein kinase 1	5.5	5.5	5.5	pKd	3
Homo sapiens	BR serine/threonine-protein kinase 2	6	6	6	pKd	3
Plasmodium falciparum (isolate 3D7)	Calcium-dependent protein kinase 1	5.9	5.9	5.9	pKd	1
Homo sapiens	CaM kinase I alpha	6	5.7	6	pKd	4
Homo sapiens	CaM kinase I delta	6.3	6	6.3	pKd	4
Homo sapiens	CaM kinase I gamma	6.4	6	6.4	pKd	3
Homo sapiens	CaM kinase II alpha	7.1	6.4	7.1	pKd	5
Homo sapiens	CaM kinase II beta	5.9	5.5	5.9	pKd	4
Homo sapiens	CaM kinase II delta	6.4	6	6.4	pKd	4
Homo sapiens	CaM kinase II gamma	6.2	6.1	6.4	pKd	6
Homo sapiens	CaM kinase IV	6.1	6.1	6.1	pKd	3
Homo sapiens	CaM-kinase kinase alpha	6.4	6.1	6.4	pKd	4
Homo sapiens	CaM-kinase kinase beta	5.8	5.2	5.8	pKd	4
Homo sapiens	Casein kinase I alpha	6.3	6.3	7	pKd	2
Homo sapiens	Casein kinase I delta	7.8	7.8	7.8	pKd	3
Homo sapiens	Casein kinase I epsilon	7.9	7.9	7.9	pKd	3
Homo sapiens	Casein kinase I gamma 1	6	6	6	pKd	3
Homo sapiens	Casein kinase I gamma 2	7	7	7	pKd	3
Homo sapiens	Casein kinase II alpha	7.1	6.1	7.1	pKd	3
Homo sapiens	Casein kinase II alpha (prime)	6.4	6.4	6.8	pKd	3
Homo sapiens	Casein kinase I isoform alpha-like	6.3	6.3	6.3	pKd	2
Homo sapiens	Casein kinase I isoform gamma-3	6.6	6.6	6.6	pKd	3
Homo sapiens	Citron Rho-interacting kinase	5.4	5.4	5.4	pKd	3
Homo sapiens	c-Jun N-terminal kinase 2	5.6	5.6	5.6	pKd	1
Homo sapiens	c-Jun N-terminal kinase 3	5.4	5.4	5.4	pKd	1
Homo sapiens	Cyclin-dependent kinase 4	5.2	5.2	5.7	pKd	2
Homo sapiens	Cyclin-dependent kinase 5	5.2	5.2	5.2	pKd	1
Homo sapiens	Cyclin-dependent kinase 7	6.5	6.5	6.5	pKd	3
Homo sapiens	Cyclin-dependent kinase-like 2	6	6	6	pKd	2
Homo sapiens	Death-associated protein kinase 1	6.9	6.9	6.9	pKd	3
Homo sapiens	Death-associated protein kinase 2	6.8	6.3	6.8	pKd	5
Homo sapiens	Death-associated protein kinase 3	7	6.5	7.7	pKd	6
Homo sapiens	Discoidin domain-containing receptor 2	5.5	5.5	5.5	pKd	1
Homo sapiens	Dual specificity mitogen-activated protein kinase kinase 1	6.9	6.9	6.9	pKd	3
Homo sapiens	Dual specificity mitogen-activated protein kinase kinase 2	7	7	7	pKd	3
Homo sapiens	Dual specificity mitogen-activated protein kinase kinase 3	5.8	5.8	5.8	pKd	1
Homo sapiens	Dual specificity mitogen-activated protein kinase kinase 4	6.2	6.2	6.2	pKd	1
Homo sapiens	Dual specificity mitogen-activated protein kinase kinase 5	7.3	7.3	7.3	pKd	1
Homo sapiens	Dual specificity mitogen-activated protein kinase kinase 6	5.3	5.3	5.3	pKd	1
Homo sapiens	Dual specificity protein kinase CLK2	7.7	6.7	7.7	pKd	6
Homo sapiens	Dual specificity protein kinase CLK4	7.5	7.1	7.5	pKd	6
Homo sapiens	Dual specificity protein kinase TTK	7.2	6.6	7.2	pKd	5
Homo sapiens	Dual-specificity tyrosine-phosphorylation regulated kinase 1A	6.7	6.7	6.7	pKd	2
Homo sapiens	Dual specificity tyrosine-phosphorylation-regulated kinase 1B	5.6	5.6	5.6	pKd	3
Homo sapiens	Dual-specificity tyrosine-phosphorylation regulated kinase 2	6.2	6.2	6.2	pKd	2
Homo sapiens	Dual specificty protein kinase CLK1	7.7	7	7.7	pKd	6
Homo sapiens	Ephrin type-A receptor 3	5.7	5.7	5.7	pKd	3
Homo sapiens	Ephrin type-A receptor 5	5.2	5.2	5.9	pKd	2
Homo sapiens	Ephrin type-A receptor 6	6	5.7	6	pKd	4
Homo sapiens	Ephrin type-A receptor 7	5.6	5.6	6.2	pKd	5
Homo sapiens	Ephrin type-B receptor 1	6.3	6	6.3	pKd	5
Homo sapiens	Ephrin type-B receptor 4	5.5	5.5	5.7	pKd	2
Homo sapiens	Epidermal growth factor receptor erbB1	6.8	4.8	6.8	pIC50	4
Homo sapiens	Epidermal growth factor receptor erbB1	5.2	5.2	6.1	pKd	5
Homo sapiens	Epithelial discoidin domain-containing receptor 1	5.7	5.7	5.7	pKd	3
Homo sapiens	Eukaryotic translation initiation factor 2-alpha kinase 4	6.8	6.8	6.8	pKd	3
Homo sapiens	Fibroblast growth factor receptor 1	6	5.5	6.8	pIC50	3
Homo sapiens	Fibroblast growth factor receptor 1	6.3	5.8	6.3	pKd	4
Homo sapiens	Fibroblast growth factor receptor 2	6.2	6.2	6.3	pKd	5
Homo sapiens	Fibroblast growth factor receptor 3	6.5	5.9	6.5	pKd	7
Homo sapiens	Fibroblast growth factor receptor 4	5.7	5.7	5.7	pKd	1
Homo sapiens	Focal adhesion kinase 1	5.8	5.8	5.8	pIC50	1
Homo sapiens	Focal adhesion kinase 1	6.4	6.2	6.4	pKd	5
Homo sapiens	G protein-coupled receptor kinase 4	6.9	6.9	6.9	pKd	2
Homo sapiens	G protein-coupled receptor kinase 7	6.8	6.8	6.8	pKd	2
Homo sapiens	Hepatocyte growth factor receptor	5	5	5.7	pIC50	2
Homo sapiens	Hepatocyte growth factor receptor	5.3	5.1	5.9	pKd	5
Homo sapiens	Homeodomain-interacting protein kinase 1	7.3	7.3	7.3	pKd	1
Homo sapiens	Homeodomain-interacting protein kinase 2	7.5	7.5	7.5	pKd	2
Homo sapiens	Homeodomain-interacting protein kinase 3	7.4	7.4	7.4	pKd	2
Homo sapiens	Homeodomain-interacting protein kinase 4	6.8	6.8	6.8	pKd	2
Homo sapiens	Hormonally up-regulated neu tumor-associated kinase	6.3	6.3	6.3	pKd	2
Homo sapiens	Inhibitor of nuclear factor kappa B kinase alpha subunit	6.3	6.3	6.3	pKd	2
Homo sapiens	Inhibitor of nuclear factor kappa B kinase epsilon subunit	6.2	6.2	6.2	pKd	3
Homo sapiens	Insulin-like growth factor I receptor	5.6	5.6	5.6	pKd	3
Homo sapiens	Insulin receptor	5.5	5.5	5.5	pIC50	1
Homo sapiens	Insulin receptor	6.3	6.3	6.8	pKd	5
Homo sapiens	Insulin receptor-related protein	6.4	6.4	6.4	pKd	3
Homo sapiens	Interferon-induced, double-stranded RNA-activated protein kinase	6.2	6.2	6.2	pKd	3
Homo sapiens	Interleukin-1 receptor-associated kinase 1	7.9	7.9	7.9	pKd	2
Homo sapiens	Interleukin-1 receptor-associated kinase 3	6	6	6	pKd	3
Homo sapiens	Interleukin-1 receptor-associated kinase 4	7.2	7.2	7.2	pKd	1
Homo sapiens	Leucine-rich repeat serine/threonine-protein kinase 2	7.6	7.6	7.8	pIC50	2
Homo sapiens	Leucine-rich repeat serine/threonine-protein kinase 2	7	7	7.1	pKd	2
Homo sapiens	Leukocyte tyrosine kinase receptor	5.8	5.8	5.8	pKd	3
Homo sapiens	Macrophage colony stimulating factor receptor	6.8	6.8	7.5	pIC50	2
Homo sapiens	Macrophage colony stimulating factor receptor	8.7	8.6	8.7	pKd	3
Homo sapiens	MAP kinase-interacting serine/threonine-protein kinase MNK1	5.4	5.4	5.4	pKd	1
Homo sapiens	MAP kinase signal-integrating kinase 2	5.2	5.2	5.2	pKd	1
Homo sapiens	MAP/microtubule affinity-regulating kinase 2	6.5	6.5	6.5	pKd	4
Homo sapiens	MAP/microtubule affinity-regulating kinase 4	5.4	5.4	5.4	pKd	3
Homo sapiens	Maternal embryonic leucine zipper kinase	6.5	6.5	6.5	pKd	3
Homo sapiens	Microtubule-associated serine/threonine-protein kinase 1	6.7	6.7	6.7	pKd	2
Homo sapiens	Misshapen-like kinase 1	7.5	7.5	7.5	pKd	2
Homo sapiens	Mitogen-activated protein kinase 7	5	5	5	pKd	1
Homo sapiens	Mitogen-activated protein kinase kinase kinase 11	5.9	5.9	5.9	pKd	3
Homo sapiens	Mitogen-activated protein kinase kinase kinase 12	7	7	7	pKd	1
Homo sapiens	Mitogen-activated protein kinase kinase kinase 13	7	7	7	pKd	2
Homo sapiens	Mitogen-activated protein kinase kinase kinase 15	5.9	5.9	5.9	pKd	2
Homo sapiens	Mitogen-activated protein kinase kinase kinase 2	7.2	7.2	7.2	pKd	2
Homo sapiens	Mitogen-activated protein kinase kinase kinase 3	6.7	6.7	6.7	pKd	2
Homo sapiens	Mitogen-activated protein kinase kinase kinase 4	5.3	5.3	5.5	pKd	2
Homo sapiens	Mitogen-activated protein kinase kinase kinase 7	7	7	7	pKd	2
Homo sapiens	Mitogen-activated protein kinase kinase kinase 9	5.5	5.5	5.5	pKd	3
Homo sapiens	Mitogen-activated protein kinase kinase kinase kinase 1	7.8	7.8	7.8	pKd	3
Homo sapiens	Mitogen-activated protein kinase kinase kinase kinase 2	7.5	7.5	7.5	pKd	1
Homo sapiens	Mitogen-activated protein kinase kinase kinase kinase 3	6.8	6.8	6.8	pKd	3
Homo sapiens	Mitogen-activated protein kinase kinase kinase kinase 4	6.9	6.9	6.9	pKd	3
Homo sapiens	Mitogen-activated protein kinase kinase kinase kinase 5	7.4	7.1	7.4	pKd	5
Homo sapiens	Muscle, skeletal receptor tyrosine protein kinase	6.3	6.3	6.3	pKd	3
Homo sapiens	Myosin IIIA	5.5	5.5	5.5	pKd	1
Homo sapiens	Myosin-IIIB	5.4	5.4	5.4	pKd	3
Homo sapiens	Myosin light chain kinase	7.6	7.6	7.6	pKd	1
Homo sapiens	myosin light chain kinase 2	7.3	7.2	7.3	pKd	5
Homo sapiens	Myosin light chain kinase family member 4	7.8	7.8	7.8	pKd	3
Gallus gallus	Myosin light chain kinase, smooth muscle	7.6	7.6	7.6	pKd	1
Homo sapiens	Myosin light chain kinase, smooth muscle	6.6	6.6	7.6	pKd	4
Homo sapiens	Nerve growth factor receptor Trk-A	7	6.7	7	pKd	5
Homo sapiens	Neurotrophic tyrosine kinase receptor type 2	6.2	6.2	6.2	pKd	3
Homo sapiens	Non-receptor tyrosine-protein kinase TNK1	6.2	6.2	6.2	pKd	3
Homo sapiens	NT-3 growth factor receptor	5.3	5.3	5.3	pKd	3
Homo sapiens	NUAK family SNF1-like kinase 1	7.3	7.3	7.3	pKd	3
Homo sapiens	NUAK family SNF1-like kinase 2	6.8	6.8	6.8	pKd	3
Homo sapiens	Phosphatidylinositol-4-phosphate 5-kinase type-1 alpha	5.3	5.3	5.3	pKd	3
Homo sapiens	Phosphatidylinositol-5-phosphate 4-kinase type-2 beta	7.4	7.4	7.4	pKd	3
Homo sapiens	Phosphorylase kinase gamma subunit 1	8.3	7.2	8.3	pKd	5
Homo sapiens	Phosphorylase kinase gamma subunit 2	8.2	7.4	8.2	pKd	5
Homo sapiens	Platelet-derived growth factor receptor alpha	6.9	6.9	6.9	pIC50	1
Homo sapiens	Platelet-derived growth factor receptor alpha	9.1	9.1	9.1	pKd	3
Homo sapiens	Platelet-derived growth factor receptor beta	7.1	4.1	8.7	pIC50	16
Homo sapiens	Platelet-derived growth factor receptor beta	10.1	9.7	10.1	pKd	5
Homo sapiens	Platelet-derived growth factor receptor beta	8.1	8.1	8.1	pKi	1
Homo sapiens	Protein kinase C alpha	5.2	5.2	5.2	pKd	1
Homo sapiens	Protein kinase C mu	6.5	6.5	6.5	pKd	3
Homo sapiens	Protein kinase C nu	6.6	6.6	6.6	pKd	3
Homo sapiens	Protein kinase C theta	5.4	5.4	5.4	pKd	3
Homo sapiens	Protein kinase N1	6.2	6.2	6.2	pKd	3
Homo sapiens	Protein kinase N2	5.9	5.9	5.9	pKd	3
Homo sapiens	Protein tyrosine kinase 2 beta	7.1	7.1	7.1	pKd	3
Homo sapiens	Proto-oncogene tyrosine-protein kinase MER	7.6	7.6	7.6	pKd	3
Homo sapiens	Putative uncharacterized serine/threonine-protein kinase SgK110	5.7	5.7	5.7	pKd	2
Homo sapiens	Receptor-interacting serine/threonine-protein kinase 1	6.4	6.4	6.4	pKd	3
Homo sapiens	Receptor-interacting serine/threonine-protein kinase 4	5.7	5.7	5.7	pKd	2
Homo sapiens	Rho-associated protein kinase 1	6.3	6.3	6.3	pKd	2
Homo sapiens	Rho-associated protein kinase 2	6.9	6.9	6.9	pKd	2
Homo sapiens	Rhodopsin kinase	6.5	6.5	6.5	pKd	2
Homo sapiens	Ribosomal protein S6 kinase 1	6.7	6.7	7.3	pKd	2
Homo sapiens	Ribosomal protein S6 kinase alpha 1	6.9	6.9	6.9	pIC50	2
Homo sapiens	Ribosomal protein S6 kinase alpha 1	6.2	5.3	7	pKd	12
Homo sapiens	Ribosomal protein S6 kinase alpha 2	7.2	5.1	7.8	pKd	16
Homo sapiens	Ribosomal protein S6 kinase alpha 3	6.7	6.7	6.7	pIC50	2
Homo sapiens	Ribosomal protein S6 kinase alpha 3	6.2	5.7	7.3	pKd	10
Homo sapiens	Ribosomal protein S6 kinase alpha 4	5.7	5.3	7	pKd	12
Homo sapiens	Ribosomal protein S6 kinase alpha 5	6.6	5.1	7.8	pKd	16
Homo sapiens	Ribosomal protein S6 kinase alpha 6	5.6	5.6	5.6	pKd	6
Homo sapiens	Serine/threonine-protein kinase 10	7.7	6.2	7.7	pKd	4
Homo sapiens	Serine/threonine-protein kinase 11	7.4	7.4	7.4	pKd	3
Homo sapiens	Serine/threonine-protein kinase 16	6.6	6.4	6.6	pKd	5
Homo sapiens	Serine/threonine-protein kinase 17A	9	7.7	9	pKd	5
Homo sapiens	Serine/threonine-protein kinase 17B	7	6.7	7	pKd	5
Homo sapiens	Serine/threonine-protein kinase 2	7.3	7.1	7.3	pKd	5
Homo sapiens	Serine/threonine-protein kinase 24	7.2	7.2	7.2	pKd	3
Homo sapiens	Serine/threonine-protein kinase 25	6.5	6.5	6.5	pKd	3
Homo sapiens	Serine/threonine-protein kinase 33	7.8	7.8	7.8	pKd	3
Homo sapiens	Serine/threonine-protein kinase 35	5.9	5.9	5.9	pKd	2
Homo sapiens	Serine/threonine-protein kinase 38	6.4	6.4	6.4	pKd	2
Homo sapiens	Serine/threonine-protein kinase 38-like	6	5.8	6	pKd	4
Homo sapiens	Serine/threonine-protein kinase AKT2	5.6	5.6	5.6	pKd	3
Homo sapiens	Serine/threonine-protein kinase Aurora-A	5.7	5.7	5.7	pIC50	1
Homo sapiens	Serine/threonine-protein kinase Aurora-A	5.8	5.2	5.8	pKd	4
Homo sapiens	Serine/threonine-protein kinase Aurora-B	5.8	5.8	5.8	pIC50	1
Homo sapiens	Serine/threonine-protein kinase Aurora-B	6.4	6.4	6.4	pKd	3
Homo sapiens	Serine/threonine-protein kinase Aurora-C	6.7	6.5	6.7	pKd	5
Homo sapiens	Serine/threonine-protein kinase Chk1	7.1	7.1	7.1	pIC50	1
Homo sapiens	Serine/threonine-protein kinase Chk1	6.5	6.5	6.5	pKd	3
Homo sapiens	Serine/threonine-protein kinase Chk2	7.8	7.8	7.8	pIC50	1
Homo sapiens	Serine/threonine-protein kinase Chk2	8	8	8.2	pKd	2
Homo sapiens	Serine/threonine-protein kinase c-TAK1	6.4	6.2	6.4	pKd	4
Homo sapiens	Serine/threonine-protein kinase D2	6.4	6.4	6.4	pKd	3
Homo sapiens	Serine/threonine-protein kinase DCLK1	6.4	6.4	6.4	pKd	3
Homo sapiens	Serine/threonine-protein kinase DCLK2	5.6	5.6	5.6	pKd	3
Homo sapiens	Serine/threonine-protein kinase DCLK3	7	7	7	pKd	3
Homo sapiens	Serine/threonine-protein kinase GAK	7.7	6.9	7.7	pKd	5
Homo sapiens	Serine/threonine-protein kinase ICK	6.3	6.3	6.3	pKd	2
Homo sapiens	Serine/threonine-protein kinase LATS1	6.2	6.2	6.2	pKd	3
Homo sapiens	Serine/threonine-protein kinase LATS2	6.3	6.3	6.3	pKd	3
Homo sapiens	Serine/threonine-protein kinase MARK1	5.9	5.9	5.9	pKd	3
Homo sapiens	Serine/threonine-protein kinase MST1	7.7	7	7.7	pKd	5
Homo sapiens	Serine/threonine-protein kinase MST2	7.3	7.3	7.3	pKd	3
Mus musculus	Serine/threonine-protein kinase MST2	6.8	6.8	6.8	pKd	1
Homo sapiens	Serine/threonine-protein kinase MST4	6.5	6.5	6.5	pKd	3
Homo sapiens	Serine/threonine-protein kinase NEK2	4.9	4.9	4.9	pIC50	1
Homo sapiens	Serine/threonine-protein kinase NEK2	5.9	5.9	6.3	pKd	5
Homo sapiens	Serine/threonine-protein kinase NEK7	5.4	5.4	5.4	pKd	3
Homo sapiens	Serine/threonine-protein kinase NIM1	6.1	6.1	6.1	pKd	2
Homo sapiens	Serine/threonine-protein kinase OSR1	6.3	6.3	6.3	pKd	2
Homo sapiens	Serine/threonine-protein kinase PAK 3	7.8	7.8	7.8	pKd	3
Homo sapiens	Serine/threonine-protein kinase PAK 4	6.3	6.3	6.3	pIC50	1
Homo sapiens	Serine/threonine-protein kinase PAK 4	5.6	5.6	5.6	pKd	3
Homo sapiens	Serine/threonine-protein kinase PAK 4	6.3	6.3	6.3	pKi	1
Homo sapiens	Serine/threonine-protein kinase PAK6	5.6	5.6	5.6	pKd	3
Homo sapiens	Serine/threonine-protein kinase PAK6	6.3	6.3	6.3	pKi	1
Homo sapiens	Serine/threonine-protein kinase PAK7	6.2	6.2	6.2	pKd	3
Homo sapiens	Serine/threonine-protein kinase PAK7	6.3	6.3	6.3	pKi	1
Homo sapiens	Serine/threonine-protein kinase PCTAIRE-1	6.8	6.8	6.9	pKd	5
Homo sapiens	Serine/threonine-protein kinase PCTAIRE-2	5.9	5.9	5.9	pKd	3
Homo sapiens	Serine/threonine-protein kinase PCTAIRE-3	5.8	5.8	5.8	pKd	3
Homo sapiens	Serine/threonine-protein kinase PFTAIRE-1	6.6	6.6	6.6	pKd	3
Homo sapiens	Serine/threonine-protein kinase PIM2	5.3	5.3	5.3	pKd	1
Homo sapiens	Serine/threonine-protein kinase PIM3	5.6	5.6	5.6	pKd	3
Mycobacterium tuberculosis	Serine/threonine-protein kinase pknB	7.1	7.1	7.1	pKd	1
Homo sapiens	Serine/threonine-protein kinase PLK2	5.3	5.3	5.3	pKd	2
Homo sapiens	Serine/threonine-protein kinase PLK4	6.7	6.4	6.7	pKd	5
Homo sapiens	Serine/threonine-protein kinase PRP4 homolog	6.4	6.4	6.4	pKd	1
Homo sapiens	Serine/threonine-protein kinase RIO1	7.5	7.5	7.5	pKd	3
Homo sapiens	Serine/threonine-protein kinase RIO2	7.3	7.3	7.3	pKd	2
Homo sapiens	Serine/threonine-protein kinase RIO3	5.4	5.4	5.4	pKd	3
Homo sapiens	Serine/threonine-protein kinase SBK1	6.7	6.7	6.7	pKd	1
Homo sapiens	Serine/threonine-protein kinase Sgk3	6.7	6.7	6.7	pKd	1
Homo sapiens	Serine/threonine-protein kinase SIK1	5.5	5.5	5.5	pKd	3
Homo sapiens	Serine/threonine-protein kinase SIK2	6.2	6.2	6.2	pKd	3
Homo sapiens	Serine/threonine-protein kinase SRPK1	6.6	6.6	6.6	pKd	3
Homo sapiens	Serine/threonine-protein kinase SRPK2	6.7	6.7	6.7	pKd	3
Homo sapiens	Serine/threonine-protein kinase SRPK3	7.2	7.2	7.2	pKd	2
Homo sapiens	Serine/threonine-protein kinase TAO1	6.1	6.1	6.1	pKd	2
Homo sapiens	Serine/threonine-protein kinase TAO3	6.7	6.7	6.7	pKd	2
Homo sapiens	Serine/threonine-protein kinase TBK1	6.9	6.9	6.9	pKd	2
Homo sapiens	Serine/threonine-protein kinase tousled-like 1	6.1	6.1	6.1	pKd	3
Homo sapiens	Serine/threonine-protein kinase tousled-like 2	6.5	6.5	6.5	pKd	3
Homo sapiens	Serine/threonine-protein kinase ULK1	7.6	7.6	7.6	pKd	2
Homo sapiens	Serine/threonine-protein kinase ULK2	7.9	7.9	7.9	pKd	2
Homo sapiens	Serine/threonine-protein kinase ULK3	7.4	7.4	7.4	pKd	2
Homo sapiens	Serine/threonine-protein kinase WEE1	6	6	6	pKd	3
Homo sapiens	SNF-related serine/threonine-protein kinase	6.2	6.2	6.2	pKd	1
Homo sapiens	SPS1/STE20-related protein kinase YSK4	7.8	7.8	7.8	pKd	2
Homo sapiens	STE20/SPS1-related proline-alanine-rich protein kinase	6.9	6.9	6.9	pKd	2
Homo sapiens	Stem cell growth factor receptor	8	6.5	9.2	pIC50	9
Homo sapiens	Stem cell growth factor receptor	9.4	6.4	9.7	pKd	23
Homo sapiens	Stem cell growth factor receptor	8.4	8.4	8.4	pKi	1
Homo sapiens	Testis-specific serine/threonine-protein kinase 1	5.2	5.2	5.2	pKd	3
Homo sapiens	TRAF2- and NCK-interacting kinase	7.6	7.6	7.6	pKd	6
Homo sapiens	Tyrosine kinase non-receptor protein 2	5.1	5.1	5.7	pKd	3
Homo sapiens	Tyrosine-protein kinase ABL	6.3	5.8	6.4	pIC50	3
Homo sapiens	Tyrosine-protein kinase ABL	6.1	5.4	7.3	pKd	36
Homo sapiens	Tyrosine-protein kinase ABL2	6	5.9	6	pKd	4
Homo sapiens	Tyrosine-protein kinase BLK	7.2	7.2	7.2	pKd	3
Homo sapiens	Tyrosine-protein kinase BRK	5.3	5.3	5.3	pKd	1
Homo sapiens	Tyrosine-protein kinase BTK	5.7	5.7	5.7	pKd	1
Homo sapiens	Tyrosine-protein kinase CTK	5.1	5.1	5.1	pKd	1
Homo sapiens	Tyrosine-protein kinase FER	6	5.9	6	pKd	4
Homo sapiens	Tyrosine-protein kinase FES	6	6	6	pKd	3
Homo sapiens	Tyrosine-protein kinase FGR	6.6	6.5	6.6	pKd	5
Homo sapiens	Tyrosine-protein kinase FRK	6.3	6.3	6.3	pKd	3
Homo sapiens	Tyrosine-protein kinase FYN	6.3	5.4	6.3	pKd	4
Homo sapiens	Tyrosine-protein kinase HCK	6.7	6.7	6.7	pIC50	1
Homo sapiens	Tyrosine-protein kinase HCK	6.1	5.5	6.1	pKd	4
Homo sapiens	Tyrosine-protein kinase ITK/TSK	7.9	7.9	7.9	pKd	3
Homo sapiens	Tyrosine-protein kinase JAK1	7.3	5.2	8.1	pKd	14
Homo sapiens	Tyrosine-protein kinase JAK2	6.4	6	6.4	pKd	8
Homo sapiens	Tyrosine-protein kinase JAK3	5.9	5.9	5.9	pKd	6
Homo sapiens	Tyrosine-protein kinase LCK	8.1	8.1	8.1	pIC50	1
Homo sapiens	Tyrosine-protein kinase LCK	6.6	5.9	6.6	pKd	4
Homo sapiens	Tyrosine-protein kinase Lyn	6.6	6.3	6.6	pKd	5
Homo sapiens	Tyrosine-protein kinase receptor FLT3	7.9	6.3	8.6	pIC50	10
Homo sapiens	Tyrosine-protein kinase receptor FLT3	9	8	9.7	pKd	21
Homo sapiens	Tyrosine-protein kinase receptor RET	6.7	5.9	6.7	pIC50	3
Homo sapiens	Tyrosine-protein kinase receptor RET	7.9	7.7	8.2	pKd	10
Homo sapiens	Tyrosine-protein kinase receptor Tie-1	5.4	5.4	5.4	pKd	1
Homo sapiens	Tyrosine-protein kinase receptor TYRO3	7.3	7.3	7.3	pKd	3
Homo sapiens	Tyrosine-protein kinase receptor UFO	8.1	8.1	8.1	pIC50	2
Homo sapiens	Tyrosine-protein kinase receptor UFO	8.1	8.1	8.1	pKd	3
Gallus gallus	Tyrosine-protein kinase SRC	6.3	6.3	6.3	pIC50	1
Homo sapiens	Tyrosine-protein kinase SRC	6.4	6.4	6.8	pIC50	2
Homo sapiens	Tyrosine-protein kinase SRC	5.7	5.5	5.7	pKd	4
Homo sapiens	Tyrosine-protein kinase TYK2	5.8	5.8	6.4	pKd	10
Homo sapiens	Tyrosine-protein kinase YES	6.9	6.6	6.9	pKd	4
Mus musculus	ULK3 kinase	7	7	7	pKd	1
Homo sapiens	Vascular endothelial growth factor receptor 1	9	9	9	pIC50	1
Homo sapiens	Vascular endothelial growth factor receptor 1	8.7	8.7	8.7	pKd	3
Homo sapiens	Vascular endothelial growth factor receptor 1	8.7	8.7	8.7	pKi	1
Homo sapiens	Vascular endothelial growth factor receptor 2	7.4	4.7	8.4	pIC50	45
Homo sapiens	Vascular endothelial growth factor receptor 2	8.8	7.5	9.7	pKd	6
Homo sapiens	Vascular endothelial growth factor receptor 2	8.1	8.1	8.5	pKi	4
Homo sapiens	Vascular endothelial growth factor receptor 3	8.1	8.1	8.1	pIC50	1
Homo sapiens	Vascular endothelial growth factor receptor 3	7.3	7.3	7.5	pKd	5
Homo sapiens	Vascular endothelial growth factor receptor 3	7.8	7.8	7.8	pKi	1

Kinase-ligand interaction pattern

• Hydrophobic • Aromatic face-to-face • Aromatic face-to-edge • H-bond donor • H-bond acceptor • Ionic positive • Ionic negative

g.l

III

αC

1 K
593

2 T
594

3 L
595

4 G
596

5 A
597

6 G
598

7 A
599

8 F
600

9 G
601

10 K
602

11 V
603

12 V
604

13 E
605

14 V
620

15 A
621

16 V
622

17 K
623

18 M
624

19 L
625

20 A
636

•

αC

b.l

21 L
637

22 M
638

23 S
639

24 E
640

25 L
641

26 K
642

27 V
643

28 L
644

29 S
645

30 Y
646

31 L
647

32 G
648

33 M
651

34 N
652

35 I
653

36 V
654

37 N
655

38 L
656

39 L
657

40 G
658

•

hinge

linker

αD

αE

41 A
659

42 L
667

43 V
668

44 I
669

45 T
670

46 E
671

47 Y
672

48 C
673

49 C
674

50 Y
675

51 G
676

52 D
677

53 L
678

54 L
679

55 N
680

56 F
681

57 L
682

58 R
683

59 R
684

60 F
782

•

••

•

αE

c.l

VII

VIII

61 L
783

62 A
784

63 S
785

64 K
786

65 N
787

66 C
788

67 I
789

68 H
790

69 R
791

70 D
792

71 L
793

72 A
794

73 A
795

74 R
796

75 N
797

76 I
798

77 L
799

78 L
800

79 I
808

80 C
809

•

DFG

a.l

81 D
810

82 F
811

83 G
812

84 L
813

85 A
814

•

••

•

Interaction pattern search

Search KLIFS for kinase-ligand complexes with similar interaction patterns: